- Bormuth, A., Gross, D., Langenberg, L., Müller-Prothmann, T. (2012): KMmaster als Lessons-Learned-Plattform bei TE Automotive. In: Andrea Back, Norbert Gronau und Klaus Tochtermann (Hrsg.): Web 2.0 und Social Media in der Unternehmenspraxis, Grundlagen, Anwendungen und Methoden mit zahlreichen Fallstudien, 3. Auflage, pp. 262-268, München: Oldenbourg Verlag.
- Müller-Prothmann, T. (2011): Innovation Networks. In: George A. Barnett (ed.): Encyclopedia of Social Networks, pp. 416-418. London: SAGE Publications.
- Müller-Prothmann, T. (2011): Be Inspired. In: Automotive Agenda 11, 3. Ausgabe 2011, Springer Fachmedien Wiesbaden, pp. 67-69.
- Müller-Prothmann, T., Stein, A. (2011): I²MM – Integrated Innovation Maturity Model for Lean Assessment of Innovation Capability, full academic paper at the XXII ISPIM Conference 2011: Sustainability in Innovation, June 12-15, 2011, Hamburg/Germany.
- Müller-Prothmann, T. (2010): Netzwerkanalyse in der Innovations- und Wissensmanagementpraxis. In: Christian Stegbauer, Roger Häußling (Hrsg.): Handbuch Netzwerkforschung, pp. 835-845, Wiesbaden: VS Verlag für Sozialwissenschaften, Springer Fachmedien
- Müller-Prothmann, T., Pinternagel, S. (2010): Give Lead Users the Lead. Integration of Requirements Engineering into Innovation Processes, accepted as full academic paper presentation at the XXI ISPIM Conference 2010: The Dynamics of Innovation, June 6-9, 2010, Bilbao/Spain.
- Müller-Prothmann, T., Pinternagel, S. (2010): Give Lead Users the Lead. Requirements Engineering as a Method for Systematical Elicitation of Future Market Demands within the Innovation Process, extended abstract presentation at the ICEME 2010 International Conference on Engineering and Meta-Engineering 2010, Orlando/Florida, April 6-9, 2010.
- Haarmann, J., Kahlert, T., Langenberg, L., Müller-Prothmann, T. (2009): K.exchange: A Systematic Approach to Knowledge Transfer of the Aging Workforce. In: The Icfai University Journal of Knowledge Management, Vol. VII, No 3&4, May&July 2009, pp. 27-40.
- Müller-Prothmann, T., Dörr, N. (2009): Innovationsmanagement. Strategien, Methoden und Werkzeuge für systematische Innovationsprozesse, München, Wien: Hanser.
- Müller-Prothmann, T., Rhinow, H. (2009):‘Innovation Profiler’ – Identification and Prioritisation of Innovation Factors Based on Social Network Analysis, paper presentation at the XX ISPIM Conference 2009: The Future of Innovation, June 21-24, 2009, Vienna/Austria.
- Borovac, S., Golata, J., Müller-Prothmann, T., Behnken, E. (2009): Integration of Customer Knowledge for the Generation of Service Innovation. In: A. S. Kazi, P. Wolf, P. Troxler (eds.): Supporting Service Innovation through Knowledge Management. Practical Insights and Case Studies., KnowledgeBoard & Swiss Knowledge Management Forum, pp. 62-81.
- Wersig, Gernot (2009): Einführung in die Publizistik- und Kommunikationswissenschaft. Erweitert und aktualisiert von Jan Krone und Tobias Müller-Prothmann, Baden-Baden: Nomos.
- Müller-Prothmann, T., Frost, I. (2008): The KMmaster® Framework for Electronic Collaboration and Knowledge Management. In: J. Salmons, L. Wilson (eds.): Handbook of Research on Electronic Collaboration and Organizational Synergy, Hershey/PA: Information Science Reference, pp. 516–530.
- Müller-Prothmann, T. (2008): Konzept für eine integrierte Ideen- und Wissensmanagementplattform, in: Ideenmanagement, Deutsches Institut für Betriebswirtschaft, Vol. 34, No. 4, pp. 108-112.
- Dörr, N., Behnken, E., Müller-Prothmann, T. (2008): Web-based Platform for Computer Aided Innovation. Combining Innovation and Product Lifecycle Management. In: IFIP 20th World Computer Congress: Proceedings of the Second Topical Session on Computer-Aided Innovation, Milano/Italy, September 7–10, 2008, Boston: Springer.
- Müller-Prothmann, T., Behnken, E. & Borovac, S. (2008): ‘Innovation Management Devils’ – A Disruptive Factor Based Analysis of Innovation Processes. Full academic paper presented at the XIX ISPIM Conference 2008: Open Innovation, Tours, France.
- Haarmann, J., Kahlert, T., Langenberg, L., Müller-Prothmann, T. (2008): K.exchange – A Systematic Approach to Knowledge Transfer of the Aging Workforce. Paper presented at the HUMAV – Human Resource Management in European Aviation 2008, Berlin/Germany.
- Müller-Prothmann, T. (2007): Social Network Analysis: A Practical Method to Improve Knowledge Sharing. In: A. S. Kazi, L. Wohlfahrt, P. Wolf (eds): Hands-On Knowledge Co-Creation and Sharing. Practical Methods and Techniques, Stuttgart, pp. 219-233.
- Müller-Prothmann, T. (2006): Leveraging Knowledge Communication for Innovation. Framework, Methods and Applications of Social Network Analysis in Research and Development, Dissertation, Frankfurt a.M. et al.: Peter Lang.
- Müller-Prothmann, T. (2006): Knowledge Communities, Communities of Practice, Knowledge Networks. In E. Coakes & S. Clarke (eds.): Encyclopedia of Communities of Practice in Information and Knowledge Management, pp. 264-271. Hershey/PA et al.
- Müller-Prothmann, T. (2006): Use and Methods of Social Network Analysis in Knowledge Management. In E. Coakes & S. Clarke (eds.): Encyclopedia of Communities of Practice in Information and Knowledge Management, pp. 565-574. Hershey/PA et al.
- Partl, H., Müller-Prothmann, T. (2006): Das Einsteigerseminar TYPO3 4.x für Webautoren, Heidelberg: bhv.
- Haase, M. & T. Müller-Prothmann (2006): Networking for Knowledge and Information. Netzwerken für erfolgreiches Unternehmertum, fundiert, Das Wissenschaftsmagazin der Freien Universität Berlin, 02/2006, pp. 56-62.
- Haase, M. & Müller-Prothmann, T. (2005): Knowledge Communication and Entrepreneurial Network Evolution. Paper presented at G-Forum 2005, 9. Interdisziplinäre Jahreskonferenz für die deutschsprachige Gründungsforschung, November 10-11, 2005, Jena, Germany.
- Müller-Prothmann, T., A. Siegberg & I. Finke (2005): Leveraging Boundary-spanning Knowledge Community Building. Interventions from a Social Network Analysis in Inter-organizational R&D Environments. In N. Gronau, P. Pawlowsky, T. Schuldhauer, P. Schütt (eds.): Wissensmanagement. Motivation, Organisation, Integration, München, pp. 247-254.
- Müller-Prothmann, T., A. Siegberg & I. Finke (2005): Inter-Organizational Knowledge Community Building: Sustaining or Overcoming the Organizational Boundaries?, Journal of Universal Knowledge Management, Volume 0, Issue 1, pp. 39-49.
- Partl, H., Müller-Prothmann, T. (2005): Das Einsteigerseminar TYPO3. Der methodische und ausführliche Einstieg, Bonn: bhv.
- Müller-Prothmann, T. (2005): Entrepreneurship in the Knowledge Society: Analysis of Entrepreneurial Network Evolution. Paper presented at the Sunbelt 2005, XXV International Social Network Conference, February 16-20, 2005, Redondo Beach, CA/USA.
- Müller-Prothmann, T. & I. Finke (2004): SELaKT – Social Network Analysis as a Method for Expert Localisation and Sustainable Knowledge Transfer, Journal of Universal Computer Science, Volume 10, Issue 6, pp. 691-701.
- Müller-Prothmann, T. (2004): Social Network Analysis as a Method for Expert Localisation and Sustainable Knowledge Transfer, Paper presented at the Sunbelt 2004, XXIV. International Social Network Conference, May 12–16, 2004, Portoroz / Slovenia.
- Müller-Prothmann, T., Siedentopf, C. (2003): Designing Online Knowledge Communities: Developing a Usability Evaluation Criteria Catalogue. Paper presented at the Knowledge Management Summer School 03 – KM in Action, September 7–12, 2003, San Sebastian/Spain.
- Müller-Prothmann, T. (2002): Neu mit System. Das Institut für Publizistik- und Kommunikationswissenschaft erhält einen neuen Internetauftritt. In: zedat4u, Hochschulrechenzentrum der Freien Universität Berlin, Herbst 2002, S. 57–59.
- Müller-Prothmann, T. (2001): Non-Profit-Sektor: Organisationstypen. In: SOCIALmanagement 4/2001, S. 10–12.
Eine Auswahl der Publikationen ist auch auf SSRN zu finden unter: http://ssrn.com/author=1081949.